forkhead box P1 [Source:VGNC Symbol;Acc:VGNC:88222]
Primary_assembly 13: 52,348,234-52,876,892 reverse strand.
Sscrofa11.1:CM000824.5
This gene has 8 transcripts (splice variants), 130 orthologues and 35 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000053905.3 | FOXP1-205 | 2352 | 692aa | ENSSSCP00000044563.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1UK03 A0A8D0IXY6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSSSCT00000053409.2 | FOXP1-202 | 5407 | 679aa | ENSSSCP00000052006.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B7F3 A0A8D1IC46 | - |
| ENSSSCT00000022793.4 | FOXP1-204 | 5283 | 671aa | ENSSSCP00000027197.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1RDU9 I3LSV4 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000104148.1 | FOXP1-207 | 3523 | 643aa | ENSSSCP00000080081.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0NN57 A0A8W4FKS6 | - |
| ENSSSCT00000094454.1 | FOXP1-203 | 2214 | 645aa | ENSSSCP00000079513.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0WK33 A0A8W4FJL0 | - |
| ENSSSCT00000012602.5 | FOXP1-208 | 2172 | 611aa | ENSSSCP00000012273.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1UPC2 A0A8D0WL77 | - |
| ENSSSCT00000064840.3 | FOXP1-206 | 2076 | 600aa | ENSSSCP00000054059.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1UQ89 A0A8D0QQQ7 | - |
| ENSSSCT00000098161.1 | FOXP1-201 | 1911 | 576aa | ENSSSCP00000078541.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1DX35 A0A8W4FGI0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
