Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HLTF ENSSSCG00000025293

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Description

helicase like transcription factor [Source:VGNC Symbol;Acc:VGNC:88897]

Location

Primary_assembly 13: 89,261,205-89,333,011 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 3 transcripts (splice variants), 184 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000023239.4	HLTF-203	5429	1009aa	ENSSSCP00000025209.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LM88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000042341.3	HLTF-201	5240	981aa	ENSSSCP00000038477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T0P9 A0A8D1U7M3	-
ENSSSCT00000051853.3	HLTF-202	5217	960aa	ENSSSCP00000045694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AP70 A0A8D1CLE4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data