Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: ATG10 ENSSSCG00000025210

.

Description

autophagy related 10 [Source:VGNC Symbol;Acc:VGNC:85613]

Location

Primary_assembly 2: 90,437,027-90,666,196 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants) and 194 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024808.4	ATG10-202	2775	220aa	ENSSSCP00000021613.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T7R9 I3LC40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000106461.1	ATG10-201	1092	174aa	ENSSSCP00000076959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1CX30 A0A8W4FDM2	-
ENSSSCT00000080336.2	ATG10-203	701	220aa	ENSSSCP00000063738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNS2 A0A8D0WZX1	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data