Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: NPLOC4 ENSSSCG00000024235

.

Description

NPL4 homolog, ubiquitin recognition factor [Source:VGNC Symbol;Acc:VGNC:90852]

Location

Primary_assembly 12: 1,251,053-1,285,666 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053452.3	NPLOC4-201	2367	788aa	ENSSSCP00000035957.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000046511.3	NPLOC4-203	4411	771aa	ENSSSCP00000052318.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B880	-
ENSSSCT00000029529.3	NPLOC4-202	4393	765aa	ENSSSCP00000020187.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L829	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000071061.1	NPLOC4-204	405	134aa	ENSSSCP00000070972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UAL1 A0A5G2RHT1	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data