Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: NFIA ENSSSCG00000023243

.

Description

nuclear factor I A [Source:VGNC Symbol;Acc:VGNC:90715]

Location

Primary_assembly 6: 150,835,494-151,426,749 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 9 transcripts (splice variants), 223 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042939.3	NFIA-206	2319	553aa	ENSSSCP00000054183.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BDI5 A0A4X1WCP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000037600.3	NFIA-208	4462	547aa	ENSSSCP00000046014.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQ42	-
ENSSSCT00000025523.4	NFIA-202	4348	502aa	ENSSSCP00000022252.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LDW7	-
ENSSSCT00000083887.1	NFIA-203	4324	545aa	ENSSSCP00000065494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKY9 A0A8D1S3G9	-
ENSSSCT00000063700.3	NFIA-205	2894	491aa	ENSSSCP00000042598.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFI4	-
ENSSSCT00000087877.2	NFIA-201	2853	490aa	ENSSSCP00000070466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R292 A0A8D1SB44	-
ENSSSCT00000074107.2	NFIA-204	2827	484aa	ENSSSCP00000066594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W5R1 A0A5G2QXD2	-
ENSSSCT00000088190.2	NFIA-207	2591	530aa	ENSSSCP00000074047.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAJ6	-
ENSSSCT00000073789.2	NFIA-209	2455	532aa	ENSSSCP00000065273.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W5Q6 A0A5G2QMK7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data