Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HNF1B ENSSSCG00000022417

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Description

HNF1 homeobox B [Source:NCBI gene (formerly Entrezgene);Acc:397002]

Location

Primary_assembly 12: 39,143,121-39,201,631 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000067450.2	HNF1B-201	2102	577aa	ENSSSCP00000069206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000023424.2	HNF1B-204	3072	557aa	ENSSSCP00000028034.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T5E6 A0A8D0ND60	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000077806.2	HNF1B-202	2068	548aa	ENSSSCP00000066526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T5F5 A0A8D0LPH0	-
ENSSSCT00000090025.1	HNF1B-203	1825	457aa	ENSSSCP00000072714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T4P3 A0A8D1H054	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data