Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBQLN1 ENSSSCG00000021005

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Description

ubiquilin 1 [Source:VGNC Symbol;Acc:VGNC:95560]

Location

Primary_assembly 10: 31,275,868-31,317,516 forward strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 2 transcripts (splice variants), 180 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000054940.3	UBQLN1-202	3966	561aa	ENSSSCP00000050492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B231 A0A4X1UTM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000047748.2	UBQLN1-201	3736	536aa	ENSSSCP00000039024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A4Y0 A0A4X1URY2	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data