Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHF23 ENSSSCG00000017937

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Description

PHD finger protein 23 [Source:VGNC Symbol;Acc:VGNC:91386]

Location

Primary_assembly 12: 52,590,804-52,595,266 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027039.4	PHF23-202	1925	403aa	ENSSSCP00000020412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V118 A0A8D0YB84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000019521.5	PHF23-201	1776	398aa	ENSSSCP00000019003.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0M6E7 F1SFU1	-
ENSSSCT00000068971.2	PHF23-203	612	158aa	ENSSSCP00000065697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V043 A0A8D0M5P2	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data