Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
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Gene: ANKFY1 ENSSSCG00000017877

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Description

ankyrin repeat and FYVE domain containing 1 [Source:VGNC Symbol;Acc:VGNC:85314]

Location

Primary_assembly 12: 50,168,049-50,251,768 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051814.3	ANKFY1-203	3994	1182aa	ENSSSCP00000051703.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5D6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000063642.2	ANKFY1-202	7623	1111aa	ENSSSCP00000051571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B555 A0A8D1MIY1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000019454.5	ANKFY1-201	7465	1147aa	ENSSSCP00000018937.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LYK9 A0A8D1B2D5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data