Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: AATF ENSSSCG00000017693

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Description

apoptosis antagonizing transcription factor [Source:VGNC Symbol;Acc:VGNC:84945]

Location

Primary_assembly 12: 38,461,830-38,564,306 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants) and 187 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000019257.4	AATF-201	2115	569aa	ENSSSCP00000018747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480MDM3 A0A4X1SYZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000087268.2	AATF-202	2755	562aa	ENSSSCP00000061763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SYZ2 A0A5G2QIB9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087145.2	AATF-204	2751	538aa	ENSSSCP00000059662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q8S9	-
ENSSSCT00000094989.1	AATF-203	2617	516aa	ENSSSCP00000074908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F6W1	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data