Gene: TNIP1 ENSSSCG00000017091

Description

TNFAIP3 interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:94275]

Location

Primary_assembly 16: 71,926,133-71,979,966 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047704.3	TNIP1-203	3050	715aa	ENSSSCP00000041299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000018609.4	TNIP1-202	4961	606aa	ENSSSCP00000018108.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1VE18	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000018608.4	TNIP1-201	2855	606aa	ENSSSCP00000018107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S0V1	-
ENSSSCT00000039989.3	TNIP1-204	2650	584aa	ENSSSCP00000058648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPV3	-
ENSSSCT00000065125.3	TNIP1-205	1864	553aa	ENSSSCP00000050752.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B2V2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: TNIP1 ENSSSCG00000017091

Breeds

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Gene: TNIP1 ENSSSCG00000017091

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