Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: TRIM23 ENSSSCG00000016948

.

Description

tripartite motif containing 23 [Source:VGNC Symbol;Acc:VGNC:94399]

Location

Primary_assembly 16: 44,103,789-44,146,280 reverse strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000033510.4	TRIM23-202	3374	574aa	ENSSSCP00000029711.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0I531 K7GP98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000052745.3	TRIM23-203	3159	479aa	ENSSSCP00000032489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1US94 A0A8D1BIZ8	-
ENSSSCT00000018456.5	TRIM23-201	1794	569aa	ENSSSCP00000017956.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SKT5	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data