Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: NRF1 ENSSSCG00000016566

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Description

nuclear respiratory factor 1 [Source:VGNC Symbol;Acc:VGNC:90895]

Location

Primary_assembly 18: 18,998,930-19,142,628 reverse strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 7 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000093712.1	NRF1-201	4653	513aa	ENSSSCP00000074638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IMD9 A0A8W4F754	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000048237.2	NRF1-207	6316	471aa	ENSSSCP00000037199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZY0	-
ENSSSCT00000045355.2	NRF1-202	6158	503aa	ENSSSCP00000045379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VYX6 A0A8D0ILK8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000104466.1	NRF1-206	6057	463aa	ENSSSCP00000076581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1FKW2 A0A8W4FB06	-
ENSSSCT00000075698.1	NRF1-204	4951	454aa	ENSSSCP00000072210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R794 A0A8D1W588	-
ENSSSCT00000018036.4	NRF1-203	3284	448aa	ENSSSCP00000017550.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0QK59 A0A8D1RV47	-
ENSSSCT00000027878.3	NRF1-205	1670	455aa	ENSSSCP00000024694.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1W3T4 A0A8D1Z1U0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data