Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DNAJC2 ENSSSCG00000015423

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Description

DnaJ heat shock protein family (Hsp40) member C2 [Source:VGNC Symbol;Acc:VGNC:108583]

Location

Primary_assembly 9: 103,329,881-103,362,608 reverse strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 4 transcripts (splice variants), 230 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091097.2	DNAJC2-203	4838	599aa	ENSSSCP00000066258.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AJA7 A0A8D1JEA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000072299.2	DNAJC2-202	4679	546aa	ENSSSCP00000060404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0KKI2 A0A8D1EYW1	-
ENSSSCT00000073245.1	DNAJC2-204	3338	116aa	ENSSSCP00000071264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V6T5 A0A8D0NNG5	-
ENSSSCT00000016801.4	DNAJC2-201	1917	585aa	ENSSSCP00000016353.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1KDY3 F1SB54	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data