Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAD23A ENSSSCG00000013747

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Description

RAD23 homolog A, nucleotide excision repair protein [Source:VGNC Symbol;Acc:VGNC:92055]

Location

Primary_assembly 2: 66,084,668-66,096,329 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050773.2	RAD23A-202	2114	417aa	ENSSSCP00000046499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ARC6 A0A8D1NB21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000081167.2	RAD23A-204	2324	415aa	ENSSSCP00000064084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPT2 A0A8D1DJT2	-
ENSSSCT00000093804.1	RAD23A-203	1318	411aa	ENSSSCP00000076734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FBN4	-
ENSSSCT00000015021.5	RAD23A-201	1014	308aa	ENSSSCP00000014616.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TBV5 A0A8D0UX56	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data