Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
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Gene: FBXL12 ENSSSCG00000013670

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Description

F-box and leucine rich repeat protein 12 [Source:VGNC Symbol;Acc:VGNC:88028]

Location

Primary_assembly 2: 68,693,001-68,706,048 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants) and 184 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014934.5	FBXL12-202	2762	393aa	ENSSSCP00000014533.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S3G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000042422.3	FBXL12-203	2580	332aa	ENSSSCP00000045102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AM37 A0A8D0YQ11	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000061080.3	FBXL12-201	1520	125aa	ENSSSCP00000036404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZY15	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data