Gene: KHSRP ENSSSCG00000013538

Description

KH-type splicing regulatory protein [Source:VGNC Symbol;Acc:VGNC:89427]

Location

Primary_assembly 2: 72,656,752-72,668,964 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 6 transcripts (splice variants), 243 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000086786.2	KHSRP-202	4624	784aa	ENSSSCP00000062380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QF76 A0A8D1NGH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000071178.2	KHSRP-203	4600	776aa	ENSSSCP00000067287.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQU4	-
ENSSSCT00000059186.3	KHSRP-204	4522	750aa	ENSSSCP00000057404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLB3 A0A8D2BIY7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000044934.3	KHSRP-205	4450	726aa	ENSSSCP00000045199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMD3 A0A8D1DFB3	-
ENSSSCT00000014785.5	KHSRP-206	4432	720aa	ENSSSCP00000014384.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0UY00 F1SBT6	-
ENSSSCT00000055256.3	KHSRP-201	2874	714aa	ENSSSCP00000036543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZY30 A0A8D1VDQ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: KHSRP ENSSSCG00000013538

Breeds

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Gene: KHSRP ENSSSCG00000013538

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