Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF128 ENSSSCG00000012551

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Description

ring finger protein 128 [Source:VGNC Symbol;Acc:VGNC:92354]

Location

Primary_assembly X: 87,111,870-87,211,601 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 3 transcripts (splice variants), 223 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000013723.6	RNF128-202	3143	431aa	ENSSSCP00000013345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W543 F1RXM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000073127.2	RNF128-201	2703	407aa	ENSSSCP00000064418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKA5 A0A8D1TWB0	-
ENSSSCT00000032289.4	RNF128-203	2682	402aa	ENSSSCP00000022610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JU31 I3LEX1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data