Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HUWE1 ENSSSCG00000012328

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Description

HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 [Source:VGNC Symbol;Acc:VGNC:89008]

Location

Primary_assembly X: 46,281,967-46,444,228 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000013481.5	HUWE1-201	13653	4415aa	ENSSSCP00000013120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V1Y8 F1RUH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000034630.4	HUWE1-204	13612	4266aa	ENSSSCP00000040826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AA97 A0A8D0PLN2	-
ENSSSCT00000032330.4	HUWE1-202	13554	4382aa	ENSSSCP00000019874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V542 I3L770	-
ENSSSCT00000035055.4	HUWE1-203	13527	4373aa	ENSSSCP00000029451.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V759 K7GNJ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data