Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RBBP7 ENSSSCG00000012149

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Description

RB binding protein 7, chromatin remodeling factor [Source:VGNC Symbol;Acc:VGNC:92137]

Location

Primary_assembly X: 13,280,977-13,317,031 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 5 transcripts (splice variants), 233 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000073801.1	RBBP7-202	1997	469aa	ENSSSCP00000074372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UYH3 A0A5G2RBI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000024779.4	RBBP7-204	3743	405aa	ENSSSCP00000027998.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LV46	-
ENSSSCT00000068173.2	RBBP7-203	1814	465aa	ENSSSCP00000061442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UYF3 A0A5G2QAL9	-
ENSSSCT00000090184.1	RBBP7-201	1809	418aa	ENSSSCP00000071372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RIG2 A0A8D1PI94	-
ENSSSCT00000075276.2	RBBP7-205	1469	445aa	ENSSSCP00000067153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UWQ1 A0A5G2QYY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data