Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG3 ENSSSCG00000011930

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Description

autophagy related 3 [Source:VGNC Symbol;Acc:VGNC:85621]

Location

Primary_assembly 13: 147,279,437-147,309,590 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants) and 222 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000082594.2	ATG3-201	1221	309aa	ENSSSCP00000064404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SU02 A0A8D0IF21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000013054.5	ATG3-205	1487	305aa	ENSSSCP00000012711.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SLS7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000074195.2	ATG3-203	1348	304aa	ENSSSCP00000069975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0S2	-
ENSSSCT00000091171.1	ATG3-204	1215	163aa	ENSSSCP00000066195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6H1 A0A8D1PSA1	-
ENSSSCT00000096956.1	ATG3-202	1122	276aa	ENSSSCP00000080278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FN04	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data