Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: FANCD2 ENSSSCG00000011563

.

Description

FA complementation group D2 [Source:VGNC Symbol;Acc:VGNC:88003]

Location

Primary_assembly 13: 66,241,967-66,310,433 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 8 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000057723.3	FANCD2-208	6579	1450aa	ENSSSCP00000037148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A065 A0A4X1UQP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000050784.3	FANCD2-207	4633	1411aa	ENSSSCP00000033780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQA1 A0A8D0WVY7	-
ENSSSCT00000045400.3	FANCD2-206	4589	1401aa	ENSSSCP00000045759.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APD9 A0A8D2BGB0	-
ENSSSCT00000012655.5	FANCD2-202	4567	1415aa	ENSSSCP00000012323.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1ICS3 F1SQC5	-
ENSSSCT00000090288.2	FANCD2-204	4518	1362aa	ENSSSCP00000060344.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UUC8 A0A5G2Q851	-
ENSSSCT00000055741.3	FANCD2-205	4382	1333aa	ENSSSCP00000049374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZU1 A0A8D0LNS0	-
ENSSSCT00000101068.1	FANCD2-201	4361	1311aa	ENSSSCP00000074620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UUC3 A0A8W4F8F8	-
ENSSSCT00000048246.2	FANCD2-203	4346	1375aa	ENSSSCP00000044401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AKI1 A0A8D0WZI2	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data