Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DCAF1 ENSSSCG00000011417

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Description

DDB1 and CUL4 associated factor 1 [Source:VGNC Symbol;Acc:VGNC:87172]

Location

Primary_assembly 13: 33,670,977-33,750,772 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants) and 255 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064016.3	DCAF1-203	7123	1511aa	ENSSSCP00000048192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0JGD6 A0A8D1GM29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000059034.3	DCAF1-204	5666	1507aa	ENSSSCP00000042405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AEG2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000070268.1	DCAF1-201	4759	1408aa	ENSSSCP00000073762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RFV3	-
ENSSSCT00000012497.4	DCAF1-202	4555	1340aa	ENSSSCP00000012171.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SEM0 A0A8D1JVM8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data