Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZMYND11 ENSSSCG00000011166

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Description

zinc finger MYND-type containing 11 [Source:VGNC Symbol;Acc:VGNC:95827]

Location

Primary_assembly 10: 69,159,455-69,295,306 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 10 transcripts (splice variants), 209 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000099682.1	ZMYND11-201	5556	617aa	ENSSSCP00000075889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480U735 A0A4X1SWN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000087917.1	ZMYND11-202	5463	586aa	ENSSSCP00000068866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MYT6 A0A8D1A2E1	-
ENSSSCT00000060375.3	ZMYND11-210	4335	563aa	ENSSSCP00000053076.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B977 A0A8D1A499	-
ENSSSCT00000054778.2	ZMYND11-206	4055	602aa	ENSSSCP00000042458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SYN3 A0A8D1RBZ7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000105071.1	ZMYND11-203	3995	508aa	ENSSSCP00000075295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0HLZ4 A0A8D1RG88	-
ENSSSCT00000058751.2	ZMYND11-207	3962	571aa	ENSSSCP00000045471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SYW1 A0A8D0HRH6	-
ENSSSCT00000012228.5	ZMYND11-208	3863	548aa	ENSSSCP00000011914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1BNE6 F1RX42	-
ENSSSCT00000097570.1	ZMYND11-205	3800	601aa	ENSSSCP00000075120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8H7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000042795.3	ZMYND11-209	3785	522aa	ENSSSCP00000057565.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLS5 A0A4X1SWV0	-
ENSSSCT00000050900.3	ZMYND11-204	3337	480aa	ENSSSCP00000057453.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BM07	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data