Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MBNL2 ENSSSCG00000009505

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Description

muscleblind like splicing regulator 2 [Source:VGNC Symbol;Acc:VGNC:90055]

Location

Primary_assembly 11: 66,481,923-66,641,653 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 8 transcripts (splice variants), 266 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010422.5	MBNL2-202	3748	391aa	ENSSSCP00000010151.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WN78 F1RP47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000052768.2	MBNL2-208	5472	385aa	ENSSSCP00000034165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZRQ4 A0A8D1IIB8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000068176.1	MBNL2-201	5358	379aa	ENSSSCP00000069032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RE09 A0A8D1WMJ4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000089536.1	MBNL2-206	4832	367aa	ENSSSCP00000065240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1USS8 A0A5G2QL12	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000044097.2	MBNL2-207	4807	355aa	ENSSSCP00000034844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTR5 A0A4X1UWD7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000080113.2	MBNL2-203	4617	377aa	ENSSSCP00000071076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1L8 A0A8D0YAK6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000054948.2	MBNL2-204	4440	300aa	ENSSSCP00000057022.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BKI8 A0A8D1CPE6	-
ENSSSCT00000076838.1	MBNL2-205	4176	212aa	ENSSSCP00000071787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0HX73 A0A8D1IFR8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data