Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: XPO4 ENSSSCG00000009276

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Description

exportin 4 [Source:VGNC Symbol;Acc:VGNC:95004]

Location

Primary_assembly 11: 1,105,014-1,208,116 reverse strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 3 transcripts (splice variants), 213 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051789.3	XPO4-201	3299	1077aa	ENSSSCP00000043959.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJ95 A0A8D1YUV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000010159.4	XPO4-202	3259	1068aa	ENSSSCP00000009893.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1CN32 F1RVA6	-
ENSSSCT00000072972.2	XPO4-203	3219	1053aa	ENSSSCP00000061384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QBF3 A0A8D1R013	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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