Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SH3D19 ENSSSCG00000009018

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Description

SH3 domain containing 19 [Source:VGNC Symbol;Acc:VGNC:92821]

Location

Primary_assembly 8: 77,689,716-77,876,664 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 4 transcripts (splice variants), 261 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000029323.3	SH3D19-204	5265	1044aa	ENSSSCP00000025759.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SN25 I3LNT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000063090.3	SH3D19-203	5129	1008aa	ENSSSCP00000044235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SJT7 F1RS91	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000078629.1	SH3D19-202	4546	728aa	ENSSSCP00000067476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RA35 A0A8D0Q940	-
ENSSSCT00000089988.2	SH3D19-201	4354	751aa	ENSSSCP00000062529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWG9 A0A8D1H7M0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data