Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP6V1C2 ENSSSCG00000008634

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Description

ATPase H+ transporting V1 subunit C2 [Source:VGNC Symbol;Acc:VGNC:85673]

Location

Primary_assembly 3: 125,775,099-125,825,244 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009446.5	ATP6V1C2-201	1771	438aa	ENSSSCP00000009203.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0UF72 F1SAA2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000044958.3	ATP6V1C2-202	1768	437aa	ENSSSCP00000052484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7P0 A0A8D1I7Q3	-
ENSSSCT00000091511.2	ATP6V1C2-203	1549	364aa	ENSSSCP00000062721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QG16 A0A8D0QEM7	-
ENSSSCT00000041858.3	ATP6V1C2-204	1426	381aa	ENSSSCP00000047382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATX8 A0A8D0UFP5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data