Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ITSN2 ENSSSCG00000008583

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Description

intersectin 2 [Source:VGNC Symbol;Acc:VGNC:89259]

Location

Primary_assembly 3: 114,363,529-114,508,444 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 7 transcripts (splice variants), 291 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000073254.2	ITSN2-205	6310	1695aa	ENSSSCP00000061222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QB09 A0A8D1IB02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000009393.5	ITSN2-203	7721	1039aa	ENSSSCP00000009153.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SDJ6	-
ENSSSCT00000101390.1	ITSN2-206	6420	1668aa	ENSSSCP00000080654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1I7X6 A0A8W4FQI7	-
ENSSSCT00000075108.2	ITSN2-207	6381	1655aa	ENSSSCP00000064819.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2P9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000099727.1	ITSN2-204	5827	1688aa	ENSSSCP00000078657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHE3	-
ENSSSCT00000093476.1	ITSN2-202	3883	1041aa	ENSSSCP00000079555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1K908 A0A8W4FJB3	-
ENSSSCT00000063673.2	ITSN2-201	3339	1112aa	ENSSSCP00000053096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B997 A0A8D1ARC5	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data