Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LMF1 ENSSSCG00000008009

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Description

lipase maturation factor 1 [Source:VGNC Symbol;Acc:VGNC:89757]

Location

Primary_assembly 3: 40,835,413-40,934,253 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046754.3	LMF1-205	1752	565aa	ENSSSCP00000059074.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000063458.3	LMF1-201	5927	350aa	ENSSSCP00000034329.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IGB2 F1RG34	-
ENSSSCT00000045033.3	LMF1-203	5845	447aa	ENSSSCP00000055218.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFA8	-
ENSSSCT00000094072.1	LMF1-204	5439	469aa	ENSSSCP00000079160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIK1	-
ENSSSCT00000054001.3	LMF1-202	1620	519aa	ENSSSCP00000040067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8C9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data