Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM8 ENSSSCG00000007818

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Description

lysine demethylase 8 [Source:VGNC Symbol;Acc:VGNC:98058]

Location

Primary_assembly 3: 19,653,402-19,676,148 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000063361.3	KDM8-202	1999	411aa	ENSSSCP00000040891.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AA58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000008567.4	KDM8-203	2299	406aa	ENSSSCP00000008347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UNW6 F1RFF8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000096221.1	KDM8-201	648	215aa	ENSSSCP00000076783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FD55	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data