Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBL2 ENSSSCG00000007709

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Description

transducin beta like 2 [Source:VGNC Symbol;Acc:VGNC:93789]

Location

Primary_assembly 3: 10,876,973-10,892,404 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000054500.3	TBL2-203	2432	453aa	ENSSSCP00000036247.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZX31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000051103.3	TBL2-201	2519	408aa	ENSSSCP00000033886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQL1 A0A4X1UPH7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000095891.1	TBL2-202	2304	436aa	ENSSSCP00000076747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UQH6 A0A8W4FBV4	-
ENSSSCT00000047812.3	TBL2-205	1373	439aa	ENSSSCP00000046606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1N7J1 F1RJN4	-
ENSSSCT00000048033.3	TBL2-204	1273	408aa	ENSSSCP00000051298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UPL7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data