Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRRAP ENSSSCG00000007606

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Description

transformation/transcription domain associated protein [Source:VGNC Symbol;Acc:VGNC:94477]

Location

Primary_assembly 3: 5,909,022-6,029,333 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 6 transcripts (splice variants), 242 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000026054.4	TRRAP-204	12372	3872aa	ENSSSCP00000027443.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LTJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000056841.3	TRRAP-202	12586	3858aa	ENSSSCP00000043762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AID5	-
ENSSSCT00000106734.1	TRRAP-203	12529	3839aa	ENSSSCP00000080878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FPM0	-
ENSSSCT00000036970.3	TRRAP-205	12351	3865aa	ENSSSCP00000046103.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APV8	-
ENSSSCT00000037063.3	TRRAP-206	12318	3854aa	ENSSSCP00000034774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTI2	-
ENSSSCT00000008346.5	TRRAP-201	12068	3847aa	ENSSSCP00000008127.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RFK3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data