Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PSMD4 ENSSSCG00000006628

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Description

proteasome 26S subunit ubiquitin receptor, non-ATPase 4 [Source:VGNC Symbol;Acc:VGNC:98839]

Location

Primary_assembly 4: 97,994,065-98,004,688 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 5 transcripts (splice variants) and 285 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007264.4	PSMD4-205	1338	380aa	ENSSSCP00000007069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A288CG47 A0A8D1Q155	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000098915.1	PSMD4-204	1344	368aa	ENSSSCP00000074710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8S0	-
ENSSSCT00000088332.1	PSMD4-201	1251	371aa	ENSSSCP00000072800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6U2 A0A8D0UY13	-
ENSSSCT00000041757.2	PSMD4-203	1249	354aa	ENSSSCP00000041985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ADL8 A0A4X1W2U3	-
ENSSSCT00000082328.1	PSMD4-202	1244	366aa	ENSSSCP00000068470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWE0 A0A8D0MFY6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data