Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: C1orf43 ENSSSCG00000006554

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Description

chromosome 4 C1orf43 homolog [Source:NCBI gene (formerly Entrezgene);Acc:100518371]

Gene Synonyms

C1orf43, NICE-3

Location

Primary_assembly 4: 95,519,992-95,530,846 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants) and 274 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007179.5	C1orf43-203	1758	253aa	ENSSSCP00000006986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1W6M3 F1RGK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000083389.2	C1orf43-204	1704	235aa	ENSSSCP00000067032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VZV1 A0A8D1T664	-
ENSSSCT00000076754.2	C1orf43-202	1390	219aa	ENSSSCP00000065365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VV85 A0A8D2CFZ5	-
ENSSSCT00000037652.3	C1orf43-201	1262	192aa	ENSSSCP00000051559.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B647 A0A4X1W2A1	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data