Gene: SHC1 ENSSSCG00000006539

Description

SHC adaptor protein 1 [Source:VGNC Symbol;Acc:VGNC:92837]

Location

Sscrofa11.1:CM000815.5

About this gene

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000034547.3	SHC1-202	3516	583aa	ENSSSCP00000028571.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1V5Y3 A0A8D1ZGN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000007161.6	SHC1-201	3375	474aa	ENSSSCP00000006968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1G301 A0A8D1G8T8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.