Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NR1I3 ENSSSCG00000006353

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Description

nuclear receptor subfamily 1 group I member 3 [Source:VGNC Symbol;Acc:VGNC:90874]

Location

Primary_assembly 4: 89,226,690-89,236,431 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 6 transcripts (splice variants), 564 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059758.3	NR1I3-204	1437	352aa	ENSSSCP00000040406.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A9D2 A0A8D1D3K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000064695.3	NR1I3-206	5647	193aa	ENSSSCP00000052085.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0QKU6 V5Q0U7	-
ENSSSCT00000006962.5	NR1I3-205	1308	309aa	ENSSSCP00000006773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VIU0 A0A8D1FAM7	-
ENSSSCT00000063426.2	NR1I3-203	1093	319aa	ENSSSCP00000034293.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VQF6 A0A8D0W8H2	-
ENSSSCT00000073288.1	NR1I3-202	888	296aa	ENSSSCP00000074497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VIQ5 A0A8D1M3Y2	-
ENSSSCT00000104287.1	NR1I3-201	506	135aa	ENSSSCP00000075762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1F5C7 V5PZS2	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data