Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC31B ENSSSCG00000006165

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Description

SEC31 homolog B, COPII coat complex component [Source:VGNC Symbol;Acc:VGNC:92681]

Location

Primary_assembly 14: 111,588,091-111,624,073 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000077395.2	SEC31B-201	4997	1210aa	ENSSSCP00000072215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TZ04 A0A5G2R798	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000049998.3	SEC31B-203	5836	1192aa	ENSSSCP00000042127.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AE12	-
ENSSSCT00000086557.2	SEC31B-204	5635	1125aa	ENSSSCP00000060179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q7T1	-
ENSSSCT00000006759.5	SEC31B-202	4814	1149aa	ENSSSCP00000006576.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2CCF3 F1RWL8	-
ENSSSCT00000060097.3	SEC31B-205	4528	1181aa	ENSSSCP00000044895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ALY3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data