Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D31 ENSSSCG00000005987

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Description

TBC1 domain family member 31 [Source:VGNC Symbol;Acc:VGNC:93776]

Location

Primary_assembly 4: 16,214,899-16,287,784 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 10 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064984.3	TBC1D31-209	4119	1066aa	ENSSSCP00000056189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BI27 A0A8D1HQI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000054858.3	TBC1D31-210	3918	999aa	ENSSSCP00000031424.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZIM3	-
ENSSSCT00000043801.3	TBC1D31-208	3902	981aa	ENSSSCP00000034335.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZS95 A0A8D1S9P7	-
ENSSSCT00000044289.2	TBC1D31-207	3447	1017aa	ENSSSCP00000059200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRR1 A0A8D1HXI3	-
ENSSSCT00000062974.3	TBC1D31-202	3420	999aa	ENSSSCP00000051307.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5C2 A0A8D1ZUT7	-
ENSSSCT00000006570.5	TBC1D31-203	3371	1031aa	ENSSSCP00000006395.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8X9AEN6	-
ENSSSCT00000042108.2	TBC1D31-204	3335	1001aa	ENSSSCP00000051612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B550 A0A8D1UDJ4	-
ENSSSCT00000025217.4	TBC1D31-206	3072	909aa	ENSSSCP00000024978.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1ZNK6 I3LLK8	-
ENSSSCT00000041765.3	TBC1D31-205	3041	903aa	ENSSSCP00000052257.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B6V7	-
ENSSSCT00000101476.1	TBC1D31-201	2456	620aa	ENSSSCP00000080257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FM25	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data