Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GFI1B ENSSSCG00000005737

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Description

growth factor independent 1B transcriptional repressor [Source:VGNC Symbol;Acc:VGNC:88421]

Location

Primary_assembly 1: 272,702,184-272,715,539 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000084120.2	GFI1B-203	2318	523aa	ENSSSCP00000074430.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000006308.5	GFI1B-201	2263	458aa	ENSSSCP00000006146.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S0S2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000076747.2	GFI1B-202	2180	477aa	ENSSSCP00000070605.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RH36	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data