Gene: STRBP ENSSSCG00000005582

Description

spermatid perinuclear RNA binding protein [Source:VGNC Symbol;Acc:VGNC:93575]

Location

Primary_assembly 1: 264,045,669-264,195,883 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 9 transcripts (splice variants), 230 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006135.5	STRBP-209	3782	678aa	ENSSSCP00000005976.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UKA1 F1SKU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000064320.2	STRBP-207	6179	672aa	ENSSSCP00000051352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5H3 A0A8D0RT88	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000083497.2	STRBP-208	5879	572aa	ENSSSCP00000060021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1ULP5 A0A8D1BWG6	-
ENSSSCT00000071337.1	STRBP-203	5558	647aa	ENSSSCP00000067700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QS05 A0A8D1GHA5	-
ENSSSCT00000052201.2	STRBP-205	3111	640aa	ENSSSCP00000046731.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0S1K0 A0A8D1WXH7	-
ENSSSCT00000050780.3	STRBP-201	2969	655aa	ENSSSCP00000058582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPZ8	-
ENSSSCT00000057725.3	STRBP-206	2777	648aa	ENSSSCP00000049879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UKA6 A0A8D1TQE1	-
ENSSSCT00000093339.1	STRBP-204	2596	657aa	ENSSSCP00000081214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UKY3 A0A8D0K698	-
ENSSSCT00000070176.2	STRBP-202	2295	639aa	ENSSSCP00000070067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7F8	-

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: STRBP ENSSSCG00000005582

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Gene: STRBP ENSSSCG00000005582

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