Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBR1 ENSSSCG00000004717

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Description

ubiquitin protein ligase E3 component n-recognin 1 [Source:VGNC Symbol;Acc:VGNC:94668]

Location

Primary_assembly 1: 128,319,311-128,474,302 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 216 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046627.1	UBR1-201	6732	1753aa	ENSSSCP00000033649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPW1 A0A8D1QW40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000005209.5	UBR1-203	6325	1725aa	ENSSSCP00000005083.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1GPT3 A0A8D1R0Y3	-
ENSSSCT00000076030.2	UBR1-202	6289	1708aa	ENSSSCP00000068094.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBU8 A0A8D1QSB0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data