Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TMOD2 ENSSSCG00000004628

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Description

tropomodulin 2 [Source:VGNC Symbol;Acc:VGNC:94227]

Location

Primary_assembly 1: 119,956,588-120,009,372 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 5 transcripts (splice variants), 124 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050687.2	TMOD2-203	8444	351aa	ENSSSCP00000055583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BG70 A0A4X1T3P0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000079757.1	TMOD2-204	8336	315aa	ENSSSCP00000067245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T3K4 A0A5G2R9G6	-
ENSSSCT00000049208.2	TMOD2-205	8321	310aa	ENSSSCP00000037063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZX1 A0A4X1T2X8	-
ENSSSCT00000064841.3	TMOD2-202	3590	296aa	ENSSSCP00000031583.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJ54 A0A8D0MTK1	-
ENSSSCT00000005111.5	TMOD2-201	2261	343aa	ENSSSCP00000004987.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T3N3 F1RZB5	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data