Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG5 ENSSSCG00000004370

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Description

autophagy related 5 [Source:VGNC Symbol;Acc:VGNC:103029]

Location

Primary_assembly 1: 72,270,799-72,520,396 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 7 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000076567.2	ATG5-206	3492	275aa	ENSSSCP00000071330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VDU3 A0A8D1AF24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000084835.1	ATG5-201	5379	163aa	ENSSSCP00000060040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QDB3 A0A8D1P0L8	-
ENSSSCT00000065385.3	ATG5-205	3349	197aa	ENSSSCP00000053675.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VDU8 A0A8D1XNP1	-
ENSSSCT00000004831.5	ATG5-204	2328	162aa	ENSSSCP00000004717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VA44 A0A8D0S8P1	-
ENSSSCT00000049307.2	ATG5-203	1340	249aa	ENSSSCP00000049924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HFV7 A0A8D1VH27	-
ENSSSCT00000067784.2	ATG5-207	897	153aa	ENSSSCP00000061560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGI2 A0A8D0N339	-
ENSSSCT00000025776.4	ATG5-202	516	91aa	ENSSSCP00000027436.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1QHN5 I3LTI9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data