syntaxin binding protein 5 [Source:VGNC Symbol;Acc:VGNC:93599]
Primary_assembly 1: 18,345,363-18,513,252 reverse strand.
Sscrofa11.1:CM000812.5
This gene has 8 transcripts (splice variants), 290 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000047188.3 | STXBP5-204 | 7067 | 1179aa | ENSSSCP00000053382.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BBD6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000059358.3 | STXBP5-207 | 7073 | 1098aa | ENSSSCP00000053731.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BBL2 A0A4X1VSS4 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000079584.1 | STXBP5-208 | 7058 | 1093aa | ENSSSCP00000068689.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1VQ65 A0A5G2RDB2 | - |
| ENSSSCT00000079679.1 | STXBP5-206 | 7038 | 1143aa | ENSSSCP00000071304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R2H8 | - |
| ENSSSCT00000061868.3 | STXBP5-205 | 6935 | 1135aa | ENSSSCP00000038368.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A335 A0A4X1VQ59 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000004548.5 | STXBP5-202 | 3752 | 1177aa | ENSSSCP00000004446.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1S7R8 | - |
| ENSSSCT00000090598.2 | STXBP5-203 | 3587 | 1122aa | ENSSSCP00000060484.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QAR0 A0A8D1BL33 | - |
| ENSSSCT00000068952.2 | STXBP5-201 | 1164 | 309aa | ENSSSCP00000062920.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QLG7 A0A8D0SV12 | - |
