Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: NUP43 ENSSSCG00000004105

.

Description

nucleoporin 43 [Source:VGNC Symbol;Acc:VGNC:90982]

Location

Primary_assembly 1: 16,249,546-16,267,624 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052785.3	NUP43-203	5264	380aa	ENSSSCP00000057685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BM32 A0A4X1VL58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000079902.2	NUP43-204	4976	284aa	ENSSSCP00000060806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VR16 A0A8D1GBE5	-
ENSSSCT00000076736.2	NUP43-201	2815	369aa	ENSSSCP00000068505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWI0 A0A8D1KMP4	-
ENSSSCT00000004540.5	NUP43-202	2757	354aa	ENSSSCP00000004438.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0HSF8 F1S7T5	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data