Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: WDTC1 ENSSSCG00000003570

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Description

WD and tetratricopeptide repeats 1 [Source:VGNC Symbol;Acc:VGNC:94952]

Location

Primary_assembly 6: 84,467,735-84,536,584 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038891.3	WDTC1-201	5343	733aa	ENSSSCP00000050655.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IVS8 A0A8D1XP27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000085400.1	WDTC1-202	5671	667aa	ENSSSCP00000072602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0NI62 A0A8D2BD07	-
ENSSSCT00000003964.4	WDTC1-203	5206	678aa	ENSSSCP00000003873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IYV9 B6CVL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data