Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ACTN4 ENSSSCG00000002965

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Description

actinin alpha 4 [Source:VGNC Symbol;Acc:VGNC:85047]

Location

Primary_assembly 6: 47,493,919-47,565,998 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 171 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000003289.4	ACTN4-203	3928	933aa	ENSSSCP00000003207.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T3R1 F1RI39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000063930.3	ACTN4-202	3890	906aa	ENSSSCP00000038760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A4Q7 A0A8D0SN05	-
ENSSSCT00000057230.3	ACTN4-204	3848	906aa	ENSSSCP00000053717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAZ5 A0A8D1XWF6	-
ENSSSCT00000052020.3	ACTN4-201	3803	877aa	ENSSSCP00000059008.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQV2	-
ENSSSCT00000060244.3	ACTN4-205	3519	840aa	ENSSSCP00000040672.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AA30	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data