Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KATNB1 ENSSSCG00000002813

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Description

katanin regulatory subunit B1 [Source:VGNC Symbol;Acc:VGNC:89312]

Location

Primary_assembly 6: 19,630,447-19,659,043 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080899.2	KATNB1-202	2377	690aa	ENSSSCP00000062865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QF89 A0A8D1L802	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000045452.3	KATNB1-203	2636	656aa	ENSSSCP00000058792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRI8 A0A4X1UXZ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000101782.1	KATNB1-204	2496	686aa	ENSSSCP00000077204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCS6	-
ENSSSCT00000003113.5	KATNB1-205	2463	615aa	ENSSSCP00000003032.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UVU3 F1RF38	-
ENSSSCT00000064806.3	KATNB1-206	2417	612aa	ENSSSCP00000046331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQZ7	-
ENSSSCT00000078807.2	KATNB1-201	2293	662aa	ENSSSCP00000072830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6X2 A0A8D1L7D8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data