Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DEF8 ENSSSCG00000002640

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Description

differentially expressed in FDCP 8 homolog [Source:VGNC Symbol;Acc:VGNC:87239]

Location

Primary_assembly 6: 140,908-160,692 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000044956.2	DEF8-202	5395	476aa	ENSSSCP00000045296.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AN20 A0A8D1GW72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000002930.5	DEF8-203	4692	446aa	ENSSSCP00000002851.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TF08 F1S6M6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000037280.3	DEF8-201	4349	434aa	ENSSSCP00000053105.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9E1 A0A8D0RRX0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data